STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cobGprecorrin-3B synthase; [P] COG0155 Sulfite reductase, beta subunit (hemoprotein). (387 aa)    
Predicted Functional Partners:
cobH
precorrin-8X methylmutase; [H] COG2082 Precorrin isomerase.
 
 0.996
cobI
[H] COG2243 Precorrin-2 methylase; Belongs to the precorrin methyltransferase family.
 
 
 0.994
cobJ
precorrin-3B C17-methyltransferase; [H] COG0007 Uroporphyrinogen-III methylase.
 
 
 0.993
cysC
ATP-sulfurylase family; Catalyzes the synthesis of activated sulfate.
  
 
 0.986
cobl
precorrin-6Y C(5,15)-methyltransferase (decarboxylating); [H] COG2242 Precorrin-6B methylase 2.
 
 
 0.971
cobN
Cobaltochelatase, CobN subunit; [H] COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
   
 0.967
EDZ48516.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
 
 0.935
EDZ46496.1
Conserved hypothetical protein; [S] COG5469 Predicted metal-binding protein.
 
     0.876
cobF
precorrin-6A synthase (deacetylating); Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A.
 
 
 0.865
RBY4I_210
60Kd inner membrane protein; [U] COG0706 Preprotein translocase subunit YidC.
   
 0.843
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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