STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ44937.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
EDZ45009.1
ABC transporter substrate binding protei; [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
       0.568
EDZ44914.1
ABC transporter ATP-binding protein; [R] COG3845 ABC-type uncharacterized transport systems, ATPase components.
       0.429
EDZ44930.1
Inner-membrane translocator; [E] COG4177 ABC-type branched-chain amino acid transport system, permease component; overlaps another CDS with the same product name.
       0.429
EDZ44931.1
ABC transporter ATP-binding protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
       0.429
EDZ44998.1
Inner-membrane translocator; [E] COG4177 ABC-type branched-chain amino acid transport system, permease component; overlaps another CDS with the same product name.
       0.429
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.