STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ44948.1Twin-arginine translocation pathway signal; [C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs. (725 aa)    
Predicted Functional Partners:
EDZ44896.1
(2Fe-2S)-binding protein; [C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 0.997
iorA
Isoquinoline 1-oxidoreductase, alpha subunit; [C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 0.991
EDZ46886.1
Molybdopterin dehydrogenase, FAD-binding; [C] COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
  
 0.942
coxS
[C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 0.930
EDZ46317.1
XdhC/CoxI family protein; [O] COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
 
 0.761
EDZ47713.1
Purine catabolism protein PucB; [H] COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A.
 
  
 0.721
EDZ48277.1
Dihydroorotate dehydrogenase family protein; [C] COG1145 Ferredoxin.
    
  0.681
EDZ44950.1
[IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.658
EDZ44972.1
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
       0.427
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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