STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDZ44962.1Trap dicarboxylate transporter, dctp subunit; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component. (381 aa)    
Predicted Functional Partners:
EDZ44954.1
Trap dicarboxylate transporter, dctq subunit; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.946
EDZ44872.1
Trap dicarboxylate transporter, dctm subunit; [Q] COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
 
  0.938
EDZ44981.1
[R] COG1064 Zn-dependent alcohol dehydrogenases.
 
   
 0.857
gno
Gluconate 5-dehydrogenase; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.849
EDZ44910.1
Transcriptional regulator, LacI family; [K] COG1609 Transcriptional regulators.
 
     0.804
dctQ
Trap-t family transporter, periplasmic ligand binding protein, dctq; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.711
EDZ48493.1
Conserved hypothetical protein.
 
 
 0.709
EDZ46190.1
Trap dicarboxylate transporter, dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
 
  0.702
EDZ47288.1
[R] COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
 
  0.700
EDZ44925.1
Conserved hypothetical protein.
  
    0.698
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.