STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
qhpCQuinohemoprotein amine dehydrogenase gamma subunit. (107 aa)    
Predicted Functional Partners:
RBY4I_57
Quinohemoprotein amine dehydrogenase, alpha subunit.
   
 
 0.971
qhpB
Quinohemoprotein amine dehydrogenase, subunit beta.
   
   0.872
RBY4I_22
Radical SAM domain protein; [R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase).
       0.814
RBY4I_25
PimS2 protein; [C] COG0644 Dehydrogenases (flavoproteins).
       0.758
EDZ46789.1
Conserved hypothetical protein; [R] COG2319 FOG: WD40 repeat.
   
   0.741
EDZ48458.1
Yvtn beta-propeller repeat family protein; [S] COG3391 Uncharacterized conserved protein.
   
   0.741
EDZ47009.1
Selenium-binding protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
   0.710
EDZ45827.1
Nitric oxide reductase subunit C, cytochrome c; [C] COG2857 Cytochrome c1.
    
   0.659
RBY4I_137
Cytochrome c family protein.
    
   0.659
exaB
[C] COG2010 Cytochrome c, mono- and diheme variants.
    
   0.659
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.