STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_427Ferric cations import ATP-binding protein FbpC 2; [P] COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.957
nosF
ABC transporter, ATP-binding protein NosF; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
  
 
0.954
EDZ46774.1
Lipid A export ATP-binding/permease protein MsbA; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
   
 
0.953
EDZ47342.1
ABC transporter, transmembrane ATP-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
   
 
0.952
EDZ47997.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
  
 
0.937
EDZ46298.1
Binding-protein-dependent transport systems inner membrane component; [E] COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 0.936
potI
Putrescine ABC transporter, permease protein; [P] COG1178 ABC-type Fe3+ transport system, permease component.
 
 0.919
EDZ48191.1
Binding-protein-dependent transport systems inner membrane component; [P] COG1178 ABC-type Fe3+ transport system, permease component; overlaps another CDS with the same product name.
 
 0.916
RBY4I_404
Binding-protein-dependent transport systems inner membrane component; [P] COG1178 ABC-type Fe3+ transport system, permease component; overlaps another CDS with the same product name.
 
 0.904
EDZ46155.1
Binding-protein-dependent transport systems inner membrane component; [P] COG4149 ABC-type molybdate transport system, permease component.
 
 0.902
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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