Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
RBY4I_49DctP; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component. (163 aa)    
Predicted Functional Partners:
RBY4I_47
DctQ; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
  0.956
RBY4I_59
DctM; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
 
  0.947
EDZ45991.1
Putative trap-type c4-dicarboxylate transport system, small permease component; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
 
 0.656
RBY4I_28
Trap dicarboxylate transporter, dctq subunit; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
 
 0.608
EDZ48493.1
Conserved hypothetical protein.
  
 
 0.608
RBY4I_74
[E] COG1984 Allophanate hydrolase subunit 2.
       0.590
RBY4I_78
[E] COG2049 Allophanate hydrolase subunit 1.
       0.590
pxpA
LamB/YcsF; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.582
EDZ46441.1
Bacterial extracellular solute-binding protein, family 7; [G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
   
 
 0.573
EDZ47760.1
Bacterial extracellular solute-binding protein, family 7; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
   
 
 0.573
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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