STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
RBY4I_557[T] COG0642 Signal transduction histidine kinase. (363 aa)    
Predicted Functional Partners:
EDZ46648.1
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.992
EDZ48440.1
Sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
 
0.982
EDZ48653.1
Virulence sensor protein BvgS; [T] COG0642 Signal transduction histidine kinase.
 
 
0.982
RBY4I_541
Sensory box sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
 
 
0.982
RBY4I_194
Periplasmic sensor hybrid histidine kinase; [T] COG0784 FOG: CheY-like receiver.
 
 
 0.981
EDZ45802.1
[T] COG0642 Signal transduction histidine kinase.
 
 
0.980
EDZ48028.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; [T] COG2202 FOG: PAS/PAC domain.
  
 0.976
EDZ47122.1
Periplasmic sensor hybrid histidine kinase; [T] COG0642 Signal transduction histidine kinase.
 
 
0.973
EDZ47184.1
[T] COG0642 Signal transduction histidine kinase.
 
 
0.973
gacS
Response regulator, sensor histidine kinase component GacS; [T] COG0642 Signal transduction histidine kinase.
 
 
0.973
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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