STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RBY4I_623Phosphonate uptake transporter; [E] COG0765 ABC-type amino acid transport system, permease component. (454 aa)    
Predicted Functional Partners:
phnD
[P] COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
 0.995
phnC_2
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.991
phnE_3
Phosphonate ABC transporter, permease protein PhnE; [P] COG2011 ABC-type metal ion transport system, permease component.
 
  
 
0.982
EDZ48386.1
Phosphonate-binding periplasmic protein; [P] COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
 
 
 0.844
phnC_1
Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.840
EDZ48131.1
Phosphonate C-P lyase system protein PhnH; [P] COG3625 Uncharacterized enzyme of phosphonate metabolism.
 
  
 0.799
RBY4I_320
Phosphonate metabolim protein, transferase hexapeptide repeat family; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.737
phnG
Phosphonate C-P lyase system protein PhnG; [P] COG3624 Uncharacterized enzyme of phosphonate metabolism.
 
  
 0.724
phnK
Phosphonate C-P lyase system protein PhnK; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
  
 0.719
phnL
Phosphonate C-P lyase system protein PhnL; [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  
 0.710
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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