STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_662[S] COG3750 Uncharacterized protein conserved in bacteria; protein /AGR_L_2151. (87 aa)    
Predicted Functional Partners:
EDZ46484.1
[S] COG3814 Uncharacterized protein conserved in bacteria.
  
   
 0.794
EDZ46975.1
[L] COG2927 DNA polymerase III, chi subunit.
  
     0.763
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.752
EDZ48382.1
[S] COG3820 Uncharacterized protein conserved in bacteria.
  
   
 0.747
EDZ46564.1
Lipoprotein, SmpA/OmlA family; [J] COG2913 Small protein A (tmRNA-binding).
  
     0.744
EDZ46300.1
[S] COG5465 Uncharacterized conserved protein.
  
     0.696
EDZ48013.1
Conserved hypothetical protein.
 
     0.671
EDZ48371.1
Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number=2.5.1.18.
  
     0.659
atpF
ATP synthase B' chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.653
RBY4I_567
Aspartyl-trna synthetase; [S] COG3807 Uncharacterized protein conserved in bacteria.
  
     0.639
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.