STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_691ErfK/YbiS/YcfS/YnhG family protein; [S] COG3034 Uncharacterized protein conserved in bacteria. (135 aa)    
Predicted Functional Partners:
EDZ47858.1
Twin-arginine translocation pathway signal; [S] COG1376 Uncharacterized protein conserved in bacteria.
 
  
 0.757
RBY4I_592
ErfK/YbiS/YcfS/YnhG; [S] COG1376 Uncharacterized protein conserved in bacteria.
 
  
 0.725
EDZ48027.1
ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein; [S] COG1376 Uncharacterized protein conserved in bacteria.
 
  
 0.569
EDZ46295.1
(Uracil-5)-methyltransferase; [J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.497
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.494
EDZ48455.1
Ion transport protein; [P] COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
       0.474
EDZ46213.1
[M] COG3409 Putative peptidoglycan-binding domain-containing protein.
  
   
 0.459
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.