STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_694Transcriptional regulator, ArsR family; [K] COG0640 Predicted transcriptional regulators. (103 aa)    
Predicted Functional Partners:
EDZ46979.1
Permease; [R] COG0701 Predicted permeases.
 
  
 0.946
EDZ47617.1
Transcriptional regulator/arsenate reductase; [K] COG0640 Predicted transcriptional regulators; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.647
EDZ46997.1
Low molecular weight phosphotyrosine protein phosphatase; [T] COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.636
EDZ47856.1
Hypothetical protein.
       0.631
arsH
Arsenical resistance protein ArsH; [R] COG0431 Predicted flavoprotein.
 
   
 0.557
EDZ47747.1
Transcriptional regulator, GntR family; [K] COG1725 Predicted transcriptional regulators.
       0.469
EDZ48603.1
Copper-translocating P-type ATPase; [P] COG2217 Cation transport ATPase.
  
  
 0.417
arsC_2
[P] COG1393 Arsenate reductase and related proteins, glutaredoxin family.
     
 0.406
EDZ47877.1
[O] COG0625 Glutathione S-transferase.
  
     0.405
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.