STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
phaDpH adaption potassium efflux system protein; [C] COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M). (513 aa)    
Predicted Functional Partners:
phaG
pH adaption potassium efflux system protein PhaG; [P] COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit.
 
 
 0.999
phaE
pH adaption potassium efflux system protein PhaE; [P] COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit.
 
 
 0.999
EDZ48613.1
NADH-ubiquinone oxidoreductase, chain 4l; [P] COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit.
 
 
 0.999
EDZ48660.1
Na+/H+ antiporter family domain protein; [CP] COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
 
0.999
EDZ46764.1
Multiple resistance and pH regulation protein F; [P] COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit.
 
 
 0.998
EDZ45026.1
NADH/ubiquinone/plastoquinone; [C] COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
 
 0.978
EDZ48425.1
Proton-translocating NADH-quinone oxidoreductase, chain L subfamily; [CP] COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
 
0.975
nuoI
NADH-quinone oxidoreductase subunit i; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.935
nuoB
NADH-quinone oxidoreductase chain b; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 0.934
napF
Ferredoxin-type protein NapF; [C] COG1145 Ferredoxin.
  
 0.932
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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