STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fprferredoxin--NADP reductase; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases. (288 aa)    
Predicted Functional Partners:
cysI
[P] COG0155 Sulfite reductase, beta subunit (hemoprotein).
 
  
  0.746
EDZ48587.1
[S] COG3749 Uncharacterized protein conserved in bacteria.
 
     0.684
paaH
phenylacetate-CoA oxygenase, PaaH subunit; [Q] COG3460 Uncharacterized enzyme of phenylacetate metabolism.
  
 
 0.650
EDZ48516.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
  0.624
paaI
phenylacetate-CoA oxygenase, PaaI subunit; [S] COG3396 Uncharacterized conserved protein.
  
 0.616
RBY4I_615
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.616
paaJ
phenylacetate-CoA oxygenase, PaaJ subunit; [R] COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
  
 
 0.591
paaG
phenylacetate-CoA oxygenase, PaaG subunit; [S] COG3396 Uncharacterized conserved protein.
  
  0.576
RBY4I_689
Phenylacetic acid catabolic family protein; [S] COG3396 Uncharacterized conserved protein.
  
  0.576
etfA
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
 
 
  0.559
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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