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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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co-expression
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RBY4I_833PaaX domain protein; [K] COG3327 Phenylacetic acid-responsive transcriptional repressor. (266 aa)    
Predicted Functional Partners:
paaD
Phenylacetic acid degradation protein PaaD; [Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
   
 0.849
paaN
Phenylacetic acid degradation protein paaN; [C] COG1012 NAD-dependent aldehyde dehydrogenases.
 
   
 0.791
RBY4I_689
Phenylacetic acid catabolic family protein; [S] COG3396 Uncharacterized conserved protein.
 
   
 0.764
RBY4I_910
Transcriptional regulator, TetR family; [K] COG1309 Transcriptional regulator.
 
     0.761
paaI
phenylacetate-CoA oxygenase, PaaI subunit; [S] COG3396 Uncharacterized conserved protein.
 
   
 0.703
paaK
Phenylacetic acid degradation oxidoreductase PaaK; [HC] COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
   
 0.663
paaJ
phenylacetate-CoA oxygenase, PaaJ subunit; [R] COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
   
 0.650
paaB
Phenylacetate degradation probable enoyl-CoA hydratase paaB; [I] COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
   
 0.640
paaG
phenylacetate-CoA oxygenase, PaaG subunit; [S] COG3396 Uncharacterized conserved protein.
 
   
 0.592
cobB-2
[K] COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.589
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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