STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cysK[E] COG0498 Threonine synthase. (388 aa)    
Predicted Functional Partners:
cysE
Serine O-acetyltransferase; [M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
 
 0.993
cysS
[J] COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.943
RBY4I_210
60Kd inner membrane protein; [U] COG0706 Preprotein translocase subunit YidC.
  
 
 0.877
EDZ45000.1
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme; [E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
 0.868
megL
Methionine gamma-lyase; [E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 0.864
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 0.860
cysC
ATP-sulfurylase family; Catalyzes the synthesis of activated sulfate.
  
  
 0.785
moaD
[H] COG1977 Molybdopterin converting factor, small subunit.
  
 0.768
cysI
[P] COG0155 Sulfite reductase, beta subunit (hemoprotein).
  
 
 0.722
hom
[E] COG0460 Homoserine dehydrogenase.
 
 
 0.681
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.