STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_897Hypothetical protein. (74 aa)    
Predicted Functional Partners:
norD
[P] COG4548 Nitric oxide reductase activation protein.
  
  
 0.899
EDZ48515.1
Nitric oxide reductase large suBunit, cytochrome b; [C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.897
norQ
NorQ protein required for nitric oxide reductase activity; [R] COG0714 MoxR-like ATPases.
     
 0.851
EDZ48453.1
Hypothetical protein.
       0.815
EDZ45827.1
Nitric oxide reductase subunit C, cytochrome c; [C] COG2857 Cytochrome c1.
  
    0.809
RBY4I_581
Hypothetical protein.
       0.519
EDZ46580.1
NnrS; [P] COG3213 Uncharacterized protein involved in response to NO.
  
  
 0.489
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.