STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBY4I_915UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit, putative; [R] COG0457 FOG: TPR repeat. (714 aa)    
Predicted Functional Partners:
EDZ48168.1
Hypothetical protein; [R] COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold; esterase/lipase/thioesterase family active site.
    
 0.838
EDZ48072.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
  
 0.654
EDZ47065.1
TPR/sulfotransferase domain protein; [R] COG0457 FOG: TPR repeat.
 
  0.605
RBY4I_607
Transcriptional regulator, sarp family; [R] COG0457 FOG: TPR repeat.
  
  
  0.499
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
       0.490
EDZ46030.1
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit; [O] COG3914 Predicted O-linked N-acetylglucosamine transferase, SPINDLY family.
 
  
 
0.483
RBY4I_364
Cytochrome c, class I; [C] COG3474 Cytochrome c2.
  
     0.454
RBY4I_637
Conserved hypothetical protein.
  
  
  0.415
EDZ48275.1
[S] COG2121 Uncharacterized protein conserved in bacteria.
       0.403
Your Current Organism:
Rhodobacterales bacterium Y4I
NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.