rpmH protein (Rhodobacterales bacterium Y4I)

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rpmH

[J] COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa)

Predicted Functional Partners:

rpoC

0.991

EDZ47474.1

0.989

rplU

0.989

rpsT

0.988

rpsN

0.985

rpsU

0.985

rplM

0.982

rpsP

0.982

rpmJ

0.982

rpsJ

0.982

Your Current Organism:

Rhodobacterales bacterium Y4I

NCBI taxonomy Id: 439496
Other names: R. bacterium Y4I

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDZ47474.1	rplM	RBY4I_2692	RBY4I_1131	[J] COG0227 Ribosomal protein L28.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.989
EDZ47474.1	rplU	RBY4I_2692	RBY4I_3551	[J] COG0227 Ribosomal protein L28.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
EDZ47474.1	rpmH	RBY4I_2692	RBY4I_956	[J] COG0227 Ribosomal protein L28.	[J] COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.989
EDZ47474.1	rpmJ	RBY4I_2692	RBY4I_375	[J] COG0227 Ribosomal protein L28.	[J] COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.981
EDZ47474.1	rpoC	RBY4I_2692	RBY4I_3474	[J] COG0227 Ribosomal protein L28.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994
EDZ47474.1	rpsJ	RBY4I_2692	RBY4I_3911	[J] COG0227 Ribosomal protein L28.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.987
EDZ47474.1	rpsN	RBY4I_2692	RBY4I_1978	[J] COG0227 Ribosomal protein L28.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.991
EDZ47474.1	rpsP	RBY4I_2692	RBY4I_1498	[J] COG0227 Ribosomal protein L28.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.987
EDZ47474.1	rpsT	RBY4I_2692	RBY4I_2615	[J] COG0227 Ribosomal protein L28.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.991
EDZ47474.1	rpsU	RBY4I_2692	RBY4I_2765	[J] COG0227 Ribosomal protein L28.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.990
rplM	EDZ47474.1	RBY4I_1131	RBY4I_2692	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0227 Ribosomal protein L28.	0.989
rplM	rplU	RBY4I_1131	RBY4I_3551	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.995
rplM	rpmH	RBY4I_1131	RBY4I_956	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.982
rplM	rpmJ	RBY4I_1131	RBY4I_375	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.	0.988
rplM	rpoC	RBY4I_1131	RBY4I_3474	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
rplM	rpsJ	RBY4I_1131	RBY4I_3911	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.992
rplM	rpsN	RBY4I_1131	RBY4I_1978	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.998
rplM	rpsP	RBY4I_1131	RBY4I_1498	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.993
rplM	rpsT	RBY4I_1131	RBY4I_2615	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.991
rplM	rpsU	RBY4I_1131	RBY4I_2765	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.986