Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| alr | lgt | cce_3719 | cce_0054 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.706 |
| alr | lspA | cce_3719 | cce_4352 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Probable lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.571 |
| cce_0055 | cce_0056 | cce_0055 | cce_0056 | Putative metal-dependent phosphohydrolase. | Hypothetical protein; Contains an S-layer homology (SLH) domain. | 0.714 |
| cce_0055 | lgt | cce_0055 | cce_0054 | Putative metal-dependent phosphohydrolase. | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.737 |
| cce_0056 | cce_0055 | cce_0056 | cce_0055 | Hypothetical protein; Contains an S-layer homology (SLH) domain. | Putative metal-dependent phosphohydrolase. | 0.714 |
| cce_0056 | lgt | cce_0056 | cce_0054 | Hypothetical protein; Contains an S-layer homology (SLH) domain. | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.680 |
| cce_1363 | cce_1364 | cce_1363 | cce_1364 | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | Putative 60 kD inner membrane insertion protein. | 0.917 |
| cce_1363 | lgt | cce_1363 | cce_0054 | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.646 |
| cce_1363 | trpA | cce_1363 | cce_2130 | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | Tryptophan synthase alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.628 |
| cce_1364 | cce_1363 | cce_1364 | cce_1363 | Putative 60 kD inner membrane insertion protein. | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | 0.917 |
| cce_1364 | lgt | cce_1364 | cce_0054 | Putative 60 kD inner membrane insertion protein. | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.779 |
| cce_1364 | trpA | cce_1364 | cce_2130 | Putative 60 kD inner membrane insertion protein. | Tryptophan synthase alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.708 |
| gpsA | lgt | cce_4760 | cce_0054 | NAD+ dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.697 |
| lgt | alr | cce_0054 | cce_3719 | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.706 |
| lgt | cce_0055 | cce_0054 | cce_0055 | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Putative metal-dependent phosphohydrolase. | 0.737 |
| lgt | cce_0056 | cce_0054 | cce_0056 | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Hypothetical protein; Contains an S-layer homology (SLH) domain. | 0.680 |
| lgt | cce_1363 | cce_0054 | cce_1363 | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Unknown; Contains a single-stranded nucleic acid binding R3H domain. | 0.646 |
| lgt | cce_1364 | cce_0054 | cce_1364 | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Putative 60 kD inner membrane insertion protein. | 0.779 |
| lgt | gpsA | cce_0054 | cce_4760 | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | NAD+ dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.697 |
| lgt | lspA | cce_0054 | cce_4352 | Polipoprotein diacylglyceryltransferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | Probable lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.787 |
page 1 of 2