STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0071Unknown; Contains a GTP-binding protein, HSR1-related domain. (537 aa)    
Predicted Functional Partners:
cce_0149
Probable protein phosphatase.
   
 0.903
cce_1172
Unknown; Contains a winged helix repressor DNA-binding and a Pleckstrin/ G-protein domain, interacting region domains.
    
 0.895
cce_5005
Hypothetical protein; Contains Helicase, C-terminal, Type III restriction enzyme, res subunit and DEAD/DEAH box helicase, N-terminal domains.
   
 0.848
cce_1609
Unknown; Contains DUF608.
    
 0.828
htpG
Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.
 
 0.781
psaK1
Photosystem I reaction center subunit X.
  
     0.755
cce_3430
Unknown.
  
     0.748
cce_2501
Conserved hypothetical protein.
  
     0.745
cce_4612
Unknown.
  
     0.720
cce_1844
Unknown; Contains an EF-Hand type domain.
  
 0.705
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.