Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ctpBCarboxyl-terminal protease; Belongs to the peptidase S41A family. (478 aa)    
Predicted Functional Partners:
hoxH
Hydrogenase large subunit.
      
 0.660
cce_0630
Putative peptidase M50.
  
  
 0.628
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
 
 0.612
hypE
Hydrogenase expression/formation protein.
   
  
 0.587
cce_0778
Unknown; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
      
 0.570
hypC
Putative hydrogenase expression/formation protein.
      
 0.570
hlyB1
Toxin secretion ABC transporter ATP-binding protein.
      
 0.566
hlyB2
Toxin secretion ABC transporter ATP-binding protein.
      
 0.566
cce_3632
Putative prenyltransferase.
   
 
 0.533
slt
Probable soluble lytic transglycosylase.
  
  
 0.490
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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