STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0168Unknown. (81 aa)    
Predicted Functional Partners:
prk
Phosphoribulokinase.
  
 
 
 0.838
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 
 0.795
cce_2132
Glyceraldehyde-3-phosphate dehydrogenase, type I.
    
 
 0.777
cce_3900
Conserved hypothetical protein.
  
     0.774
cce_1209
Conserved hypothetical protein.
 
     0.772
cce_2723
Conserved hypothetical protein.
  
     0.771
cce_0862
Unknown.
  
     0.770
cce_0494
Unknown.
  
     0.767
cce_2401
Unknown; Contains glutaredoxin 2 and thioredoxin fold domains.
  
     0.766
cce_1543
Putative CAB/ELIP/HLIP superfamily protein.
  
     0.763
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.