STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0177Putative CsbD-like protein; Belongs to the UPF0337 (CsbD) family. (60 aa)    
Predicted Functional Partners:
cce_4648
Hypothetical protein; Contains photosynthetic reaction center H-chain cytoplasmic and CHP2271 C-terminal domains.
 
    0.745
cce_1795
Conserved hypothetical protein.
  
     0.734
cce_4731
Hypothetical protein; Contains a metallophosphoesterase domain.
  
     0.707
cce_3428
Hypothetical protein.
  
    0.641
psbX
Photosystem II protein X; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.
  
     0.614
cce_0478
Conserved hypothetical protein.
  
     0.595
cce_2057
Unknown.
  
     0.589
cce_3734
Unknown.
  
     0.589
cce_2045
Unknown; Contains a TPR-like helical domain.
  
     0.568
cce_0807
Putative alpha-glucanotransferase.
  
    0.556
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.