STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0237Conserved hypothetical protein. (84 aa)    
Predicted Functional Partners:
cce_0238
Hypothetical protein; Contains a putative thiol-disulphide oxidoreductase DCC domain.
       0.740
cce_2752
Putative Deoxyribodipyrimidine photolyase.
 
     0.658
cce_0236
Hypothetical protein; Contains DUF6, transmembrane.
       0.623
cce_3554
Conserved hypothetical protein.
 
     0.483
cce_0235
Unknown.
       0.466
cce_3496
Putative cyanophycinase; Belongs to the peptidase S51 family.
  
     0.403
phrA2
DNA photolyase.
 
     0.400
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.