STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0254Glycosyl transferase, group 1. (390 aa)    
Predicted Functional Partners:
cce_0253
Glycosyl transferase, family 2.
 
    0.908
cce_1994
Unknown.
 
  
 0.709
cce_3337
Putative Glycosyl transferase, group 1.
  
     0.655
cce_0252
Unknown.
  
    0.651
cce_3184
Glycosyl transferase, family 2.
  
    0.634
cce_2097
Glycosyl transferase, group 1.
  
     0.618
cce_2596
Hypothetical protein; Contains a Lipolytic enzyme, G-D-S-L domain.
  
     0.607
cce_3333
Unknown; Contains a glycosyl transferase domain.
  
     0.588
cce_3334
Glycosyl transferase, family 2.
  
     0.537
cce_2926
Unknown.
  
     0.536
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.