Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0286Permease protein of sugar ABC transporter. (274 aa)    
Predicted Functional Partners:
cce_0748
Permease protein of sugar ABC transporter.
 0.996
cce_3418
Probable extracellular solute-binding protein, family 1.
 
 0.990
cce_0942
Probable permease protein of sugar ABC transporter, membrane component.
 
 0.982
cce_4082
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.969
cce_0276
ATP-binding protein of sugar ABC transportor; Belongs to the ABC transporter superfamily.
 
 0.965
cce_3153
ABC transporter for sugars, solute-binding protein.
 
 
 0.934
cce_1397
Putative ABC transporter for sugars.
 
 
 0.869
pcxA
CemA family protein, probable integral membrane protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the Cema family.
       0.581
cce_0761
Probable extracellular solute-binding protein, family 1.
 
   
 0.552
ycf3
Photosystem I assembly related protein; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits; Belongs to the Ycf3 family.
       0.468
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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