STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcxACemA family protein, probable integral membrane protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the Cema family. (453 aa)    
Predicted Functional Partners:
cce_0494
Unknown.
  
     0.768
cce_1746
Unknown.
  
     0.768
cce_1422
Conserved hypothetical protein.
  
     0.754
cce_2311
Conserved hypothetical protein.
  
     0.750
psaF
Photosystem I reaction center subunit III.
  
     0.745
cce_4612
Unknown.
  
     0.745
cce_4133
Unknown.
  
     0.740
cce_4116
Hypothetical protein; Contains DUF477.
 
     0.737
cce_2520
Hypothetical protein; Contains DUF565.
  
     0.736
cce_4303
Conserved hypothetical protein.
  
     0.735
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.