Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cmpABicarbontate transport system substrate-binding protein. (453 aa)    
Predicted Functional Partners:
cmpB
Bicarbontate transport system permease protein.
 0.999
cmpD
Bicarbontate transport system ATP-binding protein.
 0.997
cmpC
Bicarbontate transport system ATP-binding protein.
 
0.980
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
   
 0.845
sbtA
Sodium dependent bicarbonate transporter.
      
 0.665
ndhF3
NADH dehydrogenase subunit 5.
      
 0.611
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.606
nirA
Ferredoxin-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.583
rbcR
Putative Rubisco transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
      
 0.572
glsF
Ferredoxin-dependent glutamate synthase.
   
  
 0.563
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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