Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0343Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (48 aa)    
Predicted Functional Partners:
cce_0049
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.729
cce_4066
Putative addiction module toxin, Txe/YoeB.
 
 
 0.611
cce_0050
Putative addiction module toxin, Txe/YoeB.
 
 
 0.607
cce_0984
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.593
cce_4261
Putative addiction module toxin, Txe/YoeB.
 
 
 0.575
cce_4263
Putative addiction module toxin, Txe/YoeB.
 
 
 0.552
cce_0344
Hypothetical protein.
       0.550
cce_1706
Putative addiction module toxin, Txe/YoeB.
 
 
 0.550
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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