Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_0152 | cce_0383 | cce_0152 | cce_0383 | Putative dTDP-4-dehydrorhamnose reductase. | Hypothetical protein. | 0.606 |
| cce_0152 | rfbD | cce_0152 | cce_2548 | Putative dTDP-4-dehydrorhamnose reductase. | dTDP-6-deoxy-L-mannose-dehydrogenase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.927 |
| cce_0382 | cce_0383 | cce_0382 | cce_0383 | Hypothetical protein; Contains a thymidylate synthase domain. | Hypothetical protein. | 0.756 |
| cce_0382 | dut | cce_0382 | cce_0384 | Hypothetical protein; Contains a thymidylate synthase domain. | Deoxyuridine 5'triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.983 |
| cce_0382 | pyrFE | cce_0382 | cce_0502 | Hypothetical protein; Contains a thymidylate synthase domain. | Bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.656 |
| cce_0383 | cce_0152 | cce_0383 | cce_0152 | Hypothetical protein. | Putative dTDP-4-dehydrorhamnose reductase. | 0.606 |
| cce_0383 | cce_0382 | cce_0383 | cce_0382 | Hypothetical protein. | Hypothetical protein; Contains a thymidylate synthase domain. | 0.756 |
| cce_0383 | coaD | cce_0383 | cce_0878 | Hypothetical protein. | Coenzyme A biosynthesis protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.480 |
| cce_0383 | dut | cce_0383 | cce_0384 | Hypothetical protein. | Deoxyuridine 5'triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.607 |
| cce_0383 | pyrFE | cce_0383 | cce_0502 | Hypothetical protein. | Bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.515 |
| cce_0383 | rfbD | cce_0383 | cce_2548 | Hypothetical protein. | dTDP-6-deoxy-L-mannose-dehydrogenase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.606 |
| coaD | cce_0383 | cce_0878 | cce_0383 | Coenzyme A biosynthesis protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Hypothetical protein. | 0.480 |
| coaD | pyrFE | cce_0878 | cce_0502 | Coenzyme A biosynthesis protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.417 |
| dut | cce_0382 | cce_0384 | cce_0382 | Deoxyuridine 5'triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Hypothetical protein; Contains a thymidylate synthase domain. | 0.983 |
| dut | cce_0383 | cce_0384 | cce_0383 | Deoxyuridine 5'triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Hypothetical protein. | 0.607 |
| dut | pyrFE | cce_0384 | cce_0502 | Deoxyuridine 5'triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.494 |
| pyrFE | cce_0382 | cce_0502 | cce_0382 | Bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Hypothetical protein; Contains a thymidylate synthase domain. | 0.656 |
| pyrFE | cce_0383 | cce_0502 | cce_0383 | Bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Hypothetical protein. | 0.515 |
| pyrFE | coaD | cce_0502 | cce_0878 | Bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Coenzyme A biosynthesis protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.417 |
| pyrFE | dut | cce_0502 | cce_0384 | Bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | Deoxyuridine 5'triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.494 |
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