STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0433Conserved hypothetical protein. (132 aa)    
Predicted Functional Partners:
cce_0541
Unknown.
  
     0.775
cce_1580
Unknown.
  
     0.753
cce_0788
Unknown; Contains a peptidase S8 and S53 domain.
  
     0.735
cce_3364
Conserved hypothetical protein.
  
     0.731
cce_0738
WD40-like beta-propeller protein.
  
     0.725
cce_1231
Unknown.
  
     0.701
gst1
Glutathione S-transferase.
  
     0.690
cce_0739
WD40-like beta-propeller protein.
  
     0.682
cce_0333
Conserved hypothetical protein.
  
     0.673
cce_1156
Hypothetical protein; Contains DUF490.
  
     0.661
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.