STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0448Response regulator; Controls heterocyst pattern formation. (410 aa)    
Predicted Functional Partners:
cce_1185
Two-component hybrid sensor and regulator.
 
 
0.880
cce_4317
CheA signal transduction histidine kinase.
 
0.874
cce_1777
Probable two-component hybrid sensor and regulator.
 
 
 0.861
cce_0444
Methyl accepting chemotaxis protein.
 
  0.830
cheW
Probable chemotaxis protein.
 
 
  0.821
cce_0016
Two-component sensor histidine kinase.
  
   0.809
cce_1413
Probable sensory transduction histidine kinase.
 
 
 0.803
cce_4316
Methyl accepting chemotaxis protein.
 
 0.785
cce_1694
Two component sensor histidine kinase.
  
   0.784
cce_2624
CheA-like two-component hybrid sensor and regulator.
 
0.784
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.