STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0456Thioredoxin-like protein. (199 aa)    
Predicted Functional Partners:
cce_0149
Probable protein phosphatase.
  
 0.907
cce_2464
Hsp70-like protein; Belongs to the heat shock protein 70 family.
  
 0.840
cce_0291
Unknown; Contains a heat shock protein DnaJ, N-terminal domain.
  
 
 0.815
cce_0135
Putative rehydrin.
  
 0.792
tpx
Thioredoxin peroxidase.
  
 0.792
cce_3998
Unknown.
 
 
   0.789
cce_3393
Unknown.
  
   
 0.779
cce_3694
Conserved hypothetical protein.
  
     0.775
cce_2029
Unknown; Contains an OstA-like protein domain.
  
     0.774
cce_2740
Conserved hypothetical protein.
  
     0.774
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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