Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cce_0482Putative heavy metal transport/detoxification protein. (65 aa)    
Predicted Functional Partners:
cce_1812
Probable transcriptional regulator.
 
  
 0.834
cce_1009
Unknown.
  
 
 0.752
cce_1010
Cation-transporting ATPase.
  
 
 0.752
cce_1700
Probable copper-translocating P-type ATPase.
  
 
 0.752
cce_1917
Cation-transporting ATPase.
  
 
 0.752
cce_4385
Cation-transporting P-type ATPase.
  
 
 0.752
cce_3436
Unknown.
  
     0.734
cce_4656
Unknown.
 
     0.675
cce_3225
Conserved hypothetical protein.
  
     0.666
cce_0481
Unknown; Contains TPR_1 tetratricopeptide repeat domains.
   
   0.546
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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