STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0517Unknown; Contains a glycosyl transferase, family 2 domain. (295 aa)    
Predicted Functional Partners:
cce_2363
Probable glycosyl transferase, family 2.
  
     0.754
cce_3184
Glycosyl transferase, family 2.
  
     0.697
cce_0516
Glycosyl transferase, group 1.
  
    0.664
fcl
NAD dependent epimerase/dehydratase family protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
    0.616
cce_2097
Glycosyl transferase, group 1.
    0.584
cce_2404
Hypothetical protein; Contains glycosyl transferase, family 2 and Methyltransferase FkbM domains.
 
  
 0.547
cce_1170
Hypothetical protein; Contains a glycosyl transferase, family 2 domain.
  
     0.520
cce_0518
Unknown.
       0.460
cce_0515
Probable glycosyl transferase, group 1.
    0.459
cce_3334
Glycosyl transferase, family 2.
  
    0.457
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.