STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0521Hypothetical protein; Contains a methyltransferase FkbM domain. (284 aa)    
Predicted Functional Partners:
cce_0522
Hypothetical protein; Contains a methyltransferase FkbM domain.
 
    
0.801
cce_0520
Putative methyltransferase.
 
     0.799
cce_0523
Hypothetical protein.
       0.721
cce_0524
Unknown; Contains a glycosyl transferase, group 1 domain.
       0.670
cce_0519
Hypothetical protein; Contains glycosyl transferase, family 2 and Methyltransferase type 12 domains.
  
  
 0.599
cce_0526
Unknown; Contains a methyltransferase FkbM domain.
 
    
0.554
cce_3078
Polyketide synthase.
  
  
 0.450
cce_0525
Unknown; Contains a glycosyl transferase, family 2 domain.
  
  
 0.438
cce_3079
Probable polyketide synthase.
  
  
 0.428
cce_1466
Probable AMP-dependent synthetase and ligase.
     
 0.426
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.