STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0526Unknown; Contains a methyltransferase FkbM domain. (386 aa)    
Predicted Functional Partners:
cce_0525
Unknown; Contains a glycosyl transferase, family 2 domain.
 
     0.908
cbiGH
Probable bifunctional Cobalamin (vitamin B12) biosynthesis/precorrin-3B C17-methyltransferase.
  
  
 0.884
cce_0524
Unknown; Contains a glycosyl transferase, group 1 domain.
 
     0.735
cobM
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.708
cbiL
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.673
cce_0522
Hypothetical protein; Contains a methyltransferase FkbM domain.
 
     0.662
cbiC2
precorrin-8X methylmutase.
  
  
 0.647
cbiC1
precorrin-8X methylmutase.
  
  
 0.647
cce_0527
Unknown.
       0.645
cce_3955
Unknown; Contains a polynucleotidyl transferase, Ribonuclease H fold domain.
  
     0.598
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.