Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0577Hypothetical protein; Contains DUF81. (270 aa)    
Predicted Functional Partners:
cyl0013
Putative molybdate ABC transporter, permease protein.
       0.708
fdxB
4Fe-4S ferredoxin.
       0.675
vapB
Putative virulence associated protein B.
 
     0.531
vapC2
Putative virulence associated protein C; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
     0.527
cyl0009
GTP-binding protein, HSR1-related.
       0.498
feoB2
Ferrous iron transport protein B.
       0.498
feoA2
Ferrous iron transport protein A.
       0.498
cce_2487
Hypothetical protein.
 
     0.490
cce_4311
Hypothetical protein.
 
     0.459
cce_4795
Hypothetical protein.
  
    0.451
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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