Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0591KHG-KDPG bifunctional aldolase. (222 aa)    
Predicted Functional Partners:
glcD
Glycolate oxidase subunit.
   
 
 0.909
glcE
Glycolate oxidase subunit.
   
 
 0.909
cce_5188
Aldehyde dehydrogenase.
     
 0.909
glk
Glucokinase; Belongs to the bacterial glucokinase family.
  
 
 0.906
glcF
Glycolate oxidase subunit (Fe-S) protein.
     
 0.904
cce_2871
Alanine--glyoxylate/serine-pyruvate aminotransferase, aminotransferase class V.
     
  0.900
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
     
 0.869
pykF1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.862
cce_2132
Glyceraldehyde-3-phosphate dehydrogenase, type I.
  
 
 0.855
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.855
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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