STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0608Unknown. (545 aa)    
Predicted Functional Partners:
cce_1738
Unknown.
 
 
 0.839
exbD
Probable biopolymer transport protein.
 
 
 0.819
cce_1160
Putative biopolymer transport protein, ExbD/TolR family.
  
 
 0.765
cce_1161
Putative biopolymer transport protein, ExbD/TolR family.
  
 
 0.765
cce_3053
Putative biopolymer transport protein, ExbD/TolR family.
  
 
 0.765
exbB1
Putative biopolymer transport protein.
 
 
 0.734
cce_0235
Unknown.
  
    0.707
exbB3
Putative biopolymer transport protein.
  
 
 0.694
exbB2
Putative biopolymer transport protein.
  
 
 0.694
cce_1893
Unknown.
 
   
 0.675
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.