Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_1373 | cce_2915 | cce_1373 | cce_2915 | Hypothetical protein; Essential cell division protein. | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.423 |
| cce_1373 | cyr0035 | cce_1373 | cce_0609 | Hypothetical protein; Essential cell division protein. | Unknown. | 0.548 |
| cce_2205 | cyr0035 | cce_2205 | cce_0609 | Hypothetical protein; Contains a cell envelope-related transcriptional attenuator domain. | Unknown. | 0.514 |
| cce_2205 | minC | cce_2205 | cce_2476 | Hypothetical protein; Contains a cell envelope-related transcriptional attenuator domain. | Septum site-determining protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.470 |
| cce_2205 | sepF | cce_2205 | cce_2614 | Hypothetical protein; Contains a cell envelope-related transcriptional attenuator domain. | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.484 |
| cce_2453 | cyr0035 | cce_2453 | cce_0609 | Penicillin-binding protein 1A. | Unknown. | 0.811 |
| cce_2715 | cce_2915 | cce_2715 | cce_2915 | UPF0001-containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.838 |
| cce_2715 | cyr0035 | cce_2715 | cce_0609 | UPF0001-containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Unknown. | 0.764 |
| cce_2715 | sepF | cce_2715 | cce_2614 | UPF0001-containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.815 |
| cce_2915 | cce_1373 | cce_2915 | cce_1373 | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Hypothetical protein; Essential cell division protein. | 0.423 |
| cce_2915 | cce_2715 | cce_2915 | cce_2715 | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | UPF0001-containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.838 |
| cce_2915 | cyr0035 | cce_2915 | cce_0609 | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Unknown. | 0.777 |
| cce_2915 | minC | cce_2915 | cce_2476 | Unknown; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Septum site-determining protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.538 |
| cce_2943 | cyr0035 | cce_2943 | cce_0609 | Serine/threonine protein kinase. | Unknown. | 0.530 |
| cce_3531 | cyr0035 | cce_3531 | cce_0609 | Penicillin-binding protein 1A. | Unknown. | 0.811 |
| cce_4147 | cyr0035 | cce_4147 | cce_0609 | Penicillin-binding protein 1B. | Unknown. | 0.830 |
| cyr0035 | cce_1373 | cce_0609 | cce_1373 | Unknown. | Hypothetical protein; Essential cell division protein. | 0.548 |
| cyr0035 | cce_2205 | cce_0609 | cce_2205 | Unknown. | Hypothetical protein; Contains a cell envelope-related transcriptional attenuator domain. | 0.514 |
| cyr0035 | cce_2453 | cce_0609 | cce_2453 | Unknown. | Penicillin-binding protein 1A. | 0.811 |
| cyr0035 | cce_2715 | cce_0609 | cce_2715 | Unknown. | UPF0001-containing protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.764 |
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