STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0617Glycosyl transferase, group 1. (422 aa)    
Predicted Functional Partners:
cce_2102
Hypothetical protein.
  
    0.763
cce_0763
Glycosyl transferase, family 2.
  
    0.704
rfbB1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.700
cce_4724
Glycosyl transferase, family 2.
  
    0.681
cce_0616
Unknown; Contains a methyltransferase type 12 domain.
       0.668
cce_0618
Hypothetical protein; Contains DUF820.
       0.631
cce_2362
Putative glycosyl transferase, group I.
  
     0.567
cce_0620
Hypothetical protein; Contains DUF29.
   
   0.520
cce_2567
Hypothetical protein; Contains an Armadillo-like helical domain.
  
     0.513
cce_4707
Hypothetical protein; Contains an OmpA/MotB domain.
  
  
 0.505
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.