STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0630Putative peptidase M50. (361 aa)    
Predicted Functional Partners:
cce_2379
Bacterial surface antigen D15-like protein.
 
  
 0.780
uppS2
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
    0.702
uppS1
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
    0.691
lepB1
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.658
ctpA
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
  
  
 0.658
ctpB
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
  
  
 0.634
cce_1372
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
  
  
 0.616
lepB2
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.604
lepB3
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.575
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
    0.551
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.