STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
devAABC transporter ATP-binding protein, probable glycolipid exporter. (224 aa)    
Predicted Functional Partners:
cce_3057
Probable ABC transporter permease protein.
 
 0.970
cce_2989
Hypothetical protein; Contains DUF214.
 
 0.969
cce_3090
Putative ABC transporter permease protein.
 
 0.969
devC
ABC transporter permease protein, probable glycolipid exporter.
 
 
 0.947
devB
ABC transporter membrane fusion protein, probable glycolipid exporter.
 
 
 0.885
cce_4114
devC-like ABC transporter permease protein.
 
 
 0.883
cce_2192
Putative HlyD-family secretion protein.
  
 
 0.877
cce_4492
OppC in a binding protein-dependent transport system.
 
 
    0.862
cce_0124
Putative ABC transporter, oligopeptides.
 
 
    0.769
ftsZ
Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.710
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.