STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0679Ferredoxin-like protein. (172 aa)    
Predicted Functional Partners:
hoxF
NADH dehydrogenase I chain F.
  
 
 0.798
cce_0546
Hypothetical protein; Contains a thioredoxin fold domain.
  
 
 0.696
hoxE
Probable NADH dehydrogenase I chain E.
  
 
 0.696
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
  
 0.660
cce_0678
Two-component response regulator.
       0.554
hoxY
Hydrogenase small subunit.
   
   0.483
hoxH
Hydrogenase large subunit.
   
   0.479
cce_0680
Unknown.
       0.429
ndhD3
NADH dehydrogenase subunit 4.
  
    0.414
ndhD5
NADH dehydrogenase subunit 4.
  
    0.414
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.