Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
cce_0683Putative transcriptional regulator. (218 aa)    
Predicted Functional Partners:
cce_0682
Hypothetical protein.
       0.773
sufB
Iron-sulfur assembly protein.
  
  
 0.712
sufC
Iron-sulfur assembly ATPase.
  
  
 0.606
cce_0135
Putative rehydrin.
  
    0.601
tpx
Thioredoxin peroxidase.
  
    0.601
fur4
Ferric uptake regulation protein; Belongs to the Fur family.
 
    0.593
fur2
Probable ferric uptake regulator; Belongs to the Fur family.
  
    0.535
fur1
Ferric uptake regulation protein; Belongs to the Fur family.
  
    0.535
fur3
Ferric uptake regulation protein; Belongs to the Fur family.
  
    0.535
cce_3127
Transcription regulator, Fur family; Belongs to the Fur family.
  
    0.535
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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