STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_0683Putative transcriptional regulator. (218 aa)    
Predicted Functional Partners:
cce_0682
Hypothetical protein.
       0.773
sufB
Iron-sulfur assembly protein.
  
  
 0.701
psaB
Photosystem I P700 chlorophyll a apoprotein subunit Ib; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.
    
   0.672
fur4
Ferric uptake regulation protein; Belongs to the Fur family.
 
    0.658
cce_0135
Putative rehydrin.
  
    0.641
tpx
Thioredoxin peroxidase.
  
    0.641
fur2
Probable ferric uptake regulator; Belongs to the Fur family.
  
    0.610
fur1
Ferric uptake regulation protein; Belongs to the Fur family.
  
    0.610
fur3
Ferric uptake regulation protein; Belongs to the Fur family.
  
    0.610
cce_3127
Transcription regulator, Fur family; Belongs to the Fur family.
  
    0.610
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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