Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0697Putative acetyltransferase, Eis type. (395 aa)    
Predicted Functional Partners:
cce_0696
Hypothetical protein.
       0.773
cce_0698
Acetyltransferase, trimeric LpxA-like protein.
     
 0.563
cce_0695
Cytochrome P450.
       0.551
cce_2761
UPF0027-containing protein.
  
   
 0.544
cce_2679
Hypothetical protein.
  
     0.520
cce_3548
Hypothetical protein; Contains a YiaAB two helix domain.
  
     0.484
cce_0772
Unknown; Contains a FAD dependent oxidoreductase domain.
  
     0.477
cce_3645
Putative peptidase C14, caspase catalytic.
  
     0.449
cce_0699
Hypothetical protein.
 
   
 0.447
cce_0655
Conserved hypothetical protein.
  
     0.432
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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