cce_0720 protein (Crocosphaera subtropica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

cce_0720

Putative peptidoglycan-binding peptidase, M23B family. (685 aa)

Predicted Functional Partners:

cce_2663

0.744

cce_4147

0.631

cce_2453

0.629

cce_3531

0.604

slt

0.547

ftsZ

0.467

cce_0721

0.439

Your Current Organism:

Crocosphaera subtropica

NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cce_0720	cce_0721	cce_0720	cce_0721	Putative peptidoglycan-binding peptidase, M23B family.	Hypothetical protein; Contains a Phage integrase-like, catalytic core domain; Belongs to the 'phage' integrase family.	0.439
cce_0720	cce_2453	cce_0720	cce_2453	Putative peptidoglycan-binding peptidase, M23B family.	Penicillin-binding protein 1A.	0.629
cce_0720	cce_2663	cce_0720	cce_2663	Putative peptidoglycan-binding peptidase, M23B family.	Hypothetical protein; Contains a peptidase M23B domain.	0.744
cce_0720	cce_3531	cce_0720	cce_3531	Putative peptidoglycan-binding peptidase, M23B family.	Penicillin-binding protein 1A.	0.604
cce_0720	cce_4147	cce_0720	cce_4147	Putative peptidoglycan-binding peptidase, M23B family.	Penicillin-binding protein 1B.	0.631
cce_0720	ftsZ	cce_0720	cce_1314	Putative peptidoglycan-binding peptidase, M23B family.	Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.	0.467
cce_0720	slt	cce_0720	cce_1879	Putative peptidoglycan-binding peptidase, M23B family.	Probable soluble lytic transglycosylase.	0.547
cce_0721	cce_0720	cce_0721	cce_0720	Hypothetical protein; Contains a Phage integrase-like, catalytic core domain; Belongs to the 'phage' integrase family.	Putative peptidoglycan-binding peptidase, M23B family.	0.439
cce_2453	cce_0720	cce_2453	cce_0720	Penicillin-binding protein 1A.	Putative peptidoglycan-binding peptidase, M23B family.	0.629
cce_2453	ftsZ	cce_2453	cce_1314	Penicillin-binding protein 1A.	Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.	0.454
cce_2453	slt	cce_2453	cce_1879	Penicillin-binding protein 1A.	Probable soluble lytic transglycosylase.	0.586
cce_2663	cce_0720	cce_2663	cce_0720	Hypothetical protein; Contains a peptidase M23B domain.	Putative peptidoglycan-binding peptidase, M23B family.	0.744
cce_2663	slt	cce_2663	cce_1879	Hypothetical protein; Contains a peptidase M23B domain.	Probable soluble lytic transglycosylase.	0.697
cce_3531	cce_0720	cce_3531	cce_0720	Penicillin-binding protein 1A.	Putative peptidoglycan-binding peptidase, M23B family.	0.604
cce_3531	ftsZ	cce_3531	cce_1314	Penicillin-binding protein 1A.	Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.	0.446
cce_3531	slt	cce_3531	cce_1879	Penicillin-binding protein 1A.	Probable soluble lytic transglycosylase.	0.558
cce_4147	cce_0720	cce_4147	cce_0720	Penicillin-binding protein 1B.	Putative peptidoglycan-binding peptidase, M23B family.	0.631
cce_4147	ftsZ	cce_4147	cce_1314	Penicillin-binding protein 1B.	Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.	0.588
cce_4147	slt	cce_4147	cce_1879	Penicillin-binding protein 1B.	Probable soluble lytic transglycosylase.	0.759
ftsZ	cce_0720	cce_1314	cce_0720	Cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.	Putative peptidoglycan-binding peptidase, M23B family.	0.467

page 1 of 2

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Textmining

Co-occurrence

Experiments

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About