Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_0737Unknown; Contains a Ycf66, N-terminal domain. (288 aa)    
Predicted Functional Partners:
cce_0738
WD40-like beta-propeller protein.
 
     0.875
cce_0088
Unknown.
  
     0.775
cce_2490
Conserved hypothetical protein.
  
     0.774
cce_3704
Unknown; Contains a PRC-barrel domain.
  
     0.758
cce_2311
Conserved hypothetical protein.
  
     0.757
cce_4178
Hypothetical protein.
  
     0.753
pcyA
Putative ferredoxin-dependent bilin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
     0.731
cce_3936
Unknown.
  
     0.704
cce_3419
Unknown.
  
     0.700
cce_3583
Putative CAB/ELIP/HLIP family protein.
  
     0.699
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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